Basic Information
Locus ID:
gene-QOZ80_8BG0644700
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 2532168 | 2538509 | + | gene-QOZ80_8BG0644700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.65 | 127,094.35 Da | 38.21 | 94.72 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 80 | 1.5E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 437 | 495 | 7.5E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 718 | 1016 | 4.0E-44 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 310 | 326 | 1.2 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 310 | 8.62E-45 | - |
| SUPERFAMILY | SSF101941 | NAC domain | 1039 | 1171 | 1.83E-11 | IPR036093 |
| SUPERFAMILY | SSF52047 | RNI-like | 249 | 619 | 8.63E-65 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 717 | 1020 | 2.7E-69 | IPR011009 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 1043 | 1174 | 8.1E-7 | IPR036093 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 197 | 265 | 1.2E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 387 | 626 | 4.8E-53 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 719 | 804 | 3.6E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 196 | 1.0E-29 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 805 | 1042 | 6.3E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 266 | 386 | 2.8E-25 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 458 | 483 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 282 | 306 | 50.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 360 | 384 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 210 | 234 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 312 | 335 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 137 | 161 | 86.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 581 | 604 | 110.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 713 | 1039 | 9.1E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 713 | 1023 | 38.802788 | IPR000719 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 1030 | 1173 | 11.170304 | IPR003441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 719 | 741 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 863 | 875 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_039817120.1 | leucine-rich repeat receptor-like protein kinase TDR [Panicum virgatum] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9SRM8 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_52877 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology