Basic Information
Locus ID:
gene-QOZ80_8BG0643670
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 1409776 | 1410858 | - | gene-QOZ80_8BG0643670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.08 | 39,368.04 Da | 40.00 | 86.42 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 11 | 142 | 1.00376E-17 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 7 | 144 | 1.06E-20 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 154 | 259 | 6.0E-9 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 8 | 145 | 7.6E-19 | IPR008974 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 9 | 141 | 16.990198 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_044435833.1 | BTB/POZ and MATH domain-containing protein 3-like [Triticum aestivum] | 0 |
| TrEMBL | A0A8I6YHE8 | MATH domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0616170, gene-QOZ80_8BG0643670 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.7HG0703140.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_020918, gene-QYE76_021008 |
| Poaceae | Oryza coarctata | 1 | Oco15G001220 |
| Poaceae | Oryza sativa | 1 | LOC_Os08g03480.1 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G535900 |
| Poaceae | Triticum aestivum | 2 | TraesCS7B02G211000.1.cds1, TraesCS7D02G307800.1.cds1 |