Basic Information
Locus ID:
gene-QOZ80_8BG0642500
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
helicase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 629870 | 632519 | - | gene-QOZ80_8BG0642500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 48,436.63 Da | 51.65 | 81.69 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 7 | 44 | 4.3E-5 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 144 | 307 | 5.49E-6 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 4 | 42 | 2.75E-6 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 44 | 1.2E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 145 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 410 | 437 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 401 | 437 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 353 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002443737.1 | uncharacterized protein LOC8068547 [Sorghum bicolor] | 0 |
| TrEMBL | A0A5J9W6W5 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_10185 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0615060, gene-QOZ80_8BG0642500 |