Basic Information
Locus ID:
gene-QOZ80_8AG0637860
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 44907402 | 44908401 | - | gene-QOZ80_8AG0637860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.19 | 33,422.10 Da | 39.07 | 93.98 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 26 | 97 | 1.72759E-5 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 124 | 232 | 1.0E-22 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 19 | 99 | 5.89E-10 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 110 | 234 | 1.1E-28 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 4 | 95 | 6.8E-8 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 235 | 299 | 9.6E-15 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 110 | 230 | 8.3E-33 | IPR011333 |
| SMART | SM00225 | BTB_4 | 132 | 236 | 6.4E-20 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 132 | 199 | 17.872293 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_014660866.1 | BTB/POZ and MATH domain-containing protein 1 [Setaria italica] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9T192 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_48124 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology