Basic Information
Locus ID:
gene-QOZ80_8AG0637790
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
atbpm1,bpm1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 44857058 | 44858173 | - | gene-QOZ80_8AG0637790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.31 | 38,138.24 Da | 35.31 | 88.28 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 33 | 141 | 8.39695E-19 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 162 | 270 | 2.2E-22 | IPR000210 |
| Pfam | PF00917 | MATH domain | 34 | 136 | 2.6E-6 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 24 | 146 | 8.01E-24 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 149 | 272 | 1.1E-24 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 273 | 336 | 3.9E-14 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 146 | 268 | 5.4E-31 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 22 | 145 | 3.6E-21 | IPR008974 |
| SMART | SM00225 | BTB_4 | 170 | 274 | 1.2E-17 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 170 | 237 | 16.445236 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 17 | 141 | 14.944638 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_002444733.2 | BTB/POZ and MATH domain-containing protein 1 [Sorghum bicolor] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9T2A6 | Speckle-type POZ protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_48155 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology