Basic Information
Locus ID:
gene-QOZ80_8AG0637780
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
atbpm1,bpm1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 44846646 | 44847668 | - | gene-QOZ80_8AG0637780 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.57 | 38,087.49 Da | 36.35 | 86.59 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 150 | 270 | 2.4407E-45 | - |
| CDD | cd00121 | MATH | 20 | 131 | 3.03244E-16 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 164 | 270 | 1.3E-22 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 12 | 136 | 1.21E-23 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 143 | 270 | 9.1E-28 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 8 | 135 | 4.0E-20 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 140 | 268 | 1.3E-32 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 274 | 340 | 2.4E-14 | - |
| SMART | SM00225 | BTB_4 | 166 | 274 | 3.5E-22 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 166 | 233 | 16.982967 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 3 | 131 | 13.231482 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_034601350.1 | BTB/POZ and MATH domain-containing protein 1-like [Setaria viridis] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4V6D5R0 | BTB domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_6G222500v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology