Basic Information
Locus ID:
gene-QOZ80_8AG0637760
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
atbpm1,bpm1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 44834865 | 44835892 | - | gene-QOZ80_8AG0637760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 35,535.73 Da | 38.32 | 79.22 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14733 | BACK | 268 | 302 | 4.58824E-4 | - |
| CDD | cd00121 | MATH | 14 | 80 | 8.59076E-4 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 99 | 215 | 4.0E-26 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 87 | 215 | 2.55E-31 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 52 | 85 | 8.34E-7 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 82 | 247 | 1.5E-50 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 263 | 319 | 9.9E-9 | - |
| SMART | SM00225 | BTB_4 | 108 | 217 | 1.7E-25 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 108 | 175 | 18.285933 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_034601350.1 | BTB/POZ and MATH domain-containing protein 1-like [Setaria viridis] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A368RNZ5 | BTB domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_6G215400v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology