Basic Information
Locus ID:
gene-QOZ80_8AG0631410
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 38928465 | 38938321 | - | gene-QOZ80_8AG0631410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 132,198.59 Da | 44.20 | 100.14 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14798 | RX-CC_like | 11 | 123 | 7.36944E-9 | IPR038005 |
| Pfam | PF00560 | Leucine Rich Repeat | 612 | 634 | 1.4 | IPR001611 |
| Pfam | PF18052 | Rx N-terminal domain | 12 | 89 | 2.9E-19 | IPR041118 |
| SUPERFAMILY | SSF52058 | L domain-like | 345 | 707 | 5.78E-48 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 681 | 949 | 3.57E-16 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 1042 | 1144 | 2.13E-11 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 146 | 285 | 3.8E-26 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 145 | 260 | 8.3E-12 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 797 | 1012 | 1.3E-5 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 368 | 531 | 4.9E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1022 | 1159 | 2.2E-16 | IPR032675 |
| Gene3D | G3DSA:1.20.5.4130 | - | 12 | 128 | 1.0E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 532 | 670 | 6.1E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 671 | 796 | 3.0E-12 | IPR032675 |
| Gene3D | G3DSA:1.10.10.10 | - | 266 | 355 | 3.4E-11 | IPR036388 |
| SMART | SM00369 | LRR_typ_2 | 725 | 749 | 6.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 491 | 515 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 562 | 586 | 240.0 | IPR003591 |
| SMART | SM00367 | LRR_CC_2 | 634 | 664 | 440.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 1062 | 1089 | 1.2 | IPR006553 |
| SMART | SM00369 | LRR_typ_2 | 610 | 633 | 310.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 539 | 561 | 20.0 | IPR003591 |
| SMART | SM00367 | LRR_CC_2 | 491 | 521 | 240.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 586 | 613 | 400.0 | IPR006553 |
| PRINTS | PR00364 | Disease resistance protein signature | 747 | 763 | 1.1E-7 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 184 | 199 | 1.1E-7 | - |
| Coils | Coil | Coil | 38 | 58 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14460.1 | LRR and NB-ARC domains-containing disease resistance protein. | 0 |
| RefSeq | XP_034568257.1 | putative disease resistance protein RGA1 isoform X1 [Setaria viridis] | 0 |
| Q7XBQ9 | Disease resistance protein RGA2 OS=Solanum bulbocastanum OX=147425 GN=RGA2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9T3C4 | NB-ARC domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_48975 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology