Basic Information
Locus ID:
gene-QOZ80_8AG0629730
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 35892981 | 35897952 | + | gene-QOZ80_8AG0629730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.25 | 44,447.90 Da | 42.56 | 97.71 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 182 | 389 | 6.4E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 162 | 390 | 1.04E-60 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 273 | 398 | 1.2E-38 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 140 | 255 | 1.4E-25 | - |
| Gene3D | G3DSA:1.20.930.20 | - | 3 | 120 | 3.5E-22 | IPR036537 |
| SMART | SM00220 | serkin_6 | 181 | 398 | 4.2E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 181 | 398 | 33.813488 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 311 | 323 | - | IPR008271 |
| Coils | Coil | Coil | 66 | 86 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61420.3 | - | 0 |
| RefSeq | XP_034568736.1 | putative receptor-like protein kinase At4g00960 [Setaria viridis] | 0 |
| O64778 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g61420 OS=Arabidopsis thaliana OX=3702 GN=At1g61420 PE=3 SV=2 | 0 | |
| TrEMBL | A0A0A9ICM4 | Protein kinase domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 6 | AH04.2149, AH04.2150, AH06.444, BH04.2209, CH09.212 ... |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_5AG0390620, gene-QOZ80_8AG0629730 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.3HG0315350.1, HORVU.MOREX.r3.3HG0315360.1 ... |
| Poaceae | Oryza sativa | 3 | LOC_Os12g14480.1, LOC_Os12g14610.1, LOC_Os12g14699.1 |
| Poaceae | Paspalum vaginatum | 16 | gene-BS78_05G233500, gene-BS78_05G233900, gene-BS78_K259300 ... |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0205570, Pt_Chr0205659 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr27G005670 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G066400 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG074570 |
| Poaceae | Triticum aestivum | 4 | TraesCS1B02G036700.1, TraesCS1D02G030000.2 ... |
| Poaceae | Zoysia macrostachya | 2 | Zma_g25837, Zma_g25838 |