Basic Information
Locus ID:
gene-QOZ80_8AG0628590
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
RING-variant domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 32613860 | 32616904 | - | gene-QOZ80_8AG0628590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.17 | 35,817.86 Da | 47.54 | 92.87 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 58 | 109 | 2.33583E-21 | - |
| Pfam | PF12906 | RING-variant domain | 58 | 108 | 9.1E-12 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 53 | 113 | 1.39E-12 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 44 | 122 | 2.0E-17 | IPR013083 |
| SMART | SM00744 | ringv_2 | 57 | 109 | 1.4E-17 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 50 | 115 | 21.983213 | IPR011016 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11020.1 | RING/FYVE/PHD zinc finger superfamily protein. | 0 |
| RefSeq | XP_002466564.1 | uncharacterized protein LOC8060005 [Sorghum bicolor] | 0 |
| TrEMBL | A0A811MY23 | RING-CH-type domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS9708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology