Basic Information
Locus ID:
gene-QOZ80_8AG0623230
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 13127988 | 13128968 | - | gene-QOZ80_8AG0623230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 35,861.97 Da | 37.27 | 91.17 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 30 | 153 | 1.37421E-19 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 189 | 289 | 3.6E-13 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 26 | 156 | 7.19E-24 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 165 | 289 | 2.59E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 160 | 319 | 9.4E-30 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 22 | 156 | 2.0E-22 | IPR008974 |
| SMART | SM00225 | BTB_4 | 189 | 290 | 3.8E-9 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 20 | 152 | 17.629436 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 189 | 252 | 9.889041 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.5 | - | 0 |
| RefSeq | XP_044406335.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum aestivum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9W3Q4 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_08957 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH08.727, CH08.853 |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_8AG0622660, gene-QOZ80_8AG0623230 ... |