Basic Information
Locus ID:
gene-QOZ80_8AG0623150
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 12819624 | 12820403 | + | gene-QOZ80_8AG0623150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.93 | 28,559.47 Da | 45.79 | 98.57 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 7 | 69 | 8.48413E-5 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 97 | 212 | 6.5E-26 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 83 | 212 | 1.77E-29 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 5 | 71 | 3.92E-5 | - |
| Gene3D | G3DSA:6.10.250.3030 | - | 211 | 255 | 1.9E-16 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 76 | 210 | 1.4E-33 | IPR011333 |
| SMART | SM00225 | BTB_4 | 106 | 213 | 1.2E-22 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 106 | 175 | 17.624109 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_025821380.1 | BTB/POZ and MATH domain-containing protein 2-like [Panicum hallii] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9W4U3 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_08936 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_4BG0354030, gene-QOZ80_8AG0623140 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr27G002180 |