Basic Information
Locus ID:
gene-QOZ80_8AG0623140
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 12810921 | 12813357 | + | gene-QOZ80_8AG0623140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 20,465.25 Da | 40.11 | 81.62 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 23 | 146 | 1.59916E-22 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 19 | 148 | 6.54E-24 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 20 | 148 | 4.2E-21 | IPR008974 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 21 | 145 | 13.30819 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039771080.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 0 |
| TrEMBL | A0A5J9W4U3 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_08936 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_4BG0354030, gene-QOZ80_8AG0623140 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr27G002180 |