Basic Information
Locus ID:
gene-QOZ80_8AG0622990
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 12194264 | 12195776 | + | gene-QOZ80_8AG0622990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 40,403.50 Da | 49.49 | 85.90 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 23 | 84 | 1.35994E-6 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 179 | 288 | 2.0E-19 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 26 | 144 | 1.18E-7 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 168 | 288 | 1.65E-24 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 164 | 287 | 3.6E-29 | IPR011333 |
| Gene3D | G3DSA:6.10.250.3030 | - | 288 | 338 | 1.4E-11 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 21 | 143 | 3.1E-5 | IPR008974 |
| SMART | SM00225 | BTB_4 | 186 | 290 | 1.5E-17 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 186 | 241 | 14.025441 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039855205.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 0 |
| Q7ZX06 | Speckle-type POZ protein A OS=Xenopus laevis OX=8355 GN=spop-a PE=2 SV=1 | 0 | |
| TrEMBL | A0A3L6RLR8 | BTB/POZ and MATH domain-containing protein 2-like OS=Panicum miliaceum OX=4540 GN=C2845_PM13G06980 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene-QOZ80_8AG0622990.