Basic Information
Locus ID:
gene-QOZ80_8AG0622660
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 11425302 | 11426240 | - | gene-QOZ80_8AG0622660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.89 | 27,583.42 Da | 39.79 | 82.15 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 34 | 107 | 4.0303E-11 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 145 | 245 | 2.6E-14 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 31 | 129 | 3.76E-15 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 139 | 246 | 3.45E-15 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 31 | 137 | 3.5E-12 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 138 | 247 | 5.5E-16 | IPR011333 |
| SMART | SM00225 | BTB_4 | 147 | 246 | 4.0E-5 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 32 | 90 | 10.316559 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 147 | 211 | 10.447455 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.2 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_025822267.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum hallii] | 0 |
| TrEMBL | A0A8T0RBA8 | BTB/POZ and MATH domain-containing protein 2 OS=Panicum virgatum OX=38727 GN=PVAP13_6KG183900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH08.727, CH08.853 |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_8AG0622660, gene-QOZ80_8AG0623230 ... |