Basic Information
Locus ID:
gene-QOZ80_8AG0622440
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 10917716 | 10918688 | - | gene-QOZ80_8AG0622440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 21,725.16 Da | 49.46 | 71.22 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 21 | 150 | 9.60137E-22 | IPR002083 |
| Pfam | PF00917 | MATH domain | 37 | 150 | 1.2E-4 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 17 | 155 | 7.03E-30 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 19 | 153 | 1.1E-27 | IPR008974 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 20 | 149 | 17.833992 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03740.1 | BTB-POZ and MATH domain 4. | 0 |
| RefSeq | XP_039855185.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 0 |
| Q9SRV1 | BTB/POZ and MATH domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=BPM4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9W3U2 | Speckle-type POZ protein-like protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_09002 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology