Basic Information
Locus ID:
gene-QOZ80_8AG0622370
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 10707841 | 10708668 | - | gene-QOZ80_8AG0622370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 24,611.73 Da | 41.71 | 82.28 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 154 | 211 | 0.00345726 | - |
| CDD | cd00121 | MATH | 13 | 123 | 2.18118E-16 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 12 | 128 | 3.92E-20 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 12 | 86 | 1.0E-7 | IPR008974 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 12 | 122 | 12.515535 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021321498.1 | BTB/POZ and MATH domain-containing protein 2 [Sorghum bicolor] | 0 |
| TrEMBL | A0A5J9W3W2 | ULP_PROTEASE domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_09023 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH08.700, BH08.747, CH08.832, CH09.1648 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0622370, gene-QOZ80_8BG0650660 |