Basic Information
Locus ID:
gene-QOZ80_8AG0622340
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 10656602 | 10657702 | + | gene-QOZ80_8AG0622340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 41,311.65 Da | 46.42 | 82.35 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 19 | 149 | 4.15508E-18 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 187 | 299 | 1.3E-22 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 18 | 156 | 1.96E-23 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 178 | 298 | 4.32E-24 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 300 | 364 | 2.2E-16 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 17 | 155 | 2.3E-21 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 170 | 299 | 6.5E-28 | IPR011333 |
| SMART | SM00225 | BTB_4 | 195 | 300 | 2.8E-18 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 18 | 151 | 17.322601 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 195 | 262 | 15.390453 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_039853421.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9W599 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_08910 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0622340, gene-QOZ80_8BG0650630 |