Basic Information
Locus ID:
gene-QOZ80_8AG0621070
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
F-box-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 8633603 | 8634894 | - | gene-QOZ80_8AG0621070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 41,434.50 Da | 50.68 | 87.42 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 15 | 56 | 8.4E-10 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 65 | 2.62E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 10 | 58 | 1.4E-9 | - |
| SMART | SM00256 | fbox_2 | 18 | 59 | 1.5E-7 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 12 | 65 | 8.782121 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 111 | 131 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 108 | 131 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_004972614.1 | uncharacterized protein LOC101760046 [Setaria italica] | 0 |
| TrEMBL | A0A5J9W7A8 | 4-coumarate--CoA ligase (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_09699 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 9 | AH05.2918, BH05.1292, BH05.2981, BH08.655, BH08.658 ... |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_8AG0621050, gene-QOZ80_8AG0621070 ... |
| Poaceae | Hordeum vulgare | 12 | HORVU.MOREX.r3.1HG0081260.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 34 | gene-QYE76_007113, gene-QYE76_013869, gene-QYE76_016171 ... |
| Poaceae | Oryza coarctata | 1 | Oco23G005750 |
| Poaceae | Oryza sativa | 1 | LOC_Os08g10340.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_07G079400 |
| Poaceae | Puccinellia tenuiflora | 20 | Pt_Chr0100005, Pt_Chr0100006, Pt_Chr0400333, Pt_Chr0401546 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr02G016430 |
| Poaceae | Thinopyrum elongatum | 12 | Tel1E01G210900, Tel1E01G537800, Tel1E01G537900 ... |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC1AG051830, gene_TRIDC1AG052480 ... |
| Poaceae | Triticum aestivum | 38 | TraesCS1A02G113500.1, TraesCS1A02G351100.1.cds1 ... |