Basic Information
Locus ID:
gene-QOZ80_8AG0620910
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 8006937 | 8014852 | + | gene-QOZ80_8AG0620910 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 108,891.32 Da | 34.02 | 92.37 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 663 | 928 | 7.37104E-97 | - |
| Pfam | PF00069 | Protein kinase domain | 659 | 923 | 4.7E-46 | IPR000719 |
| Pfam | PF11721 | Malectin domain | 425 | 576 | 1.1E-38 | IPR021720 |
| SUPERFAMILY | SSF52058 | L domain-like | 83 | 396 | 1.33E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 637 | 926 | 2.87E-81 | IPR011009 |
| Gene3D | G3DSA:2.60.120.430 | - | 422 | 581 | 4.6E-29 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 628 | 732 | 2.0E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 51 | 276 | 1.3E-49 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 733 | 940 | 5.8E-62 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 277 | 404 | 4.4E-19 | IPR032675 |
| SMART | SM00365 | LRR_sd22_2 | 143 | 169 | 170.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 312 | 338 | 38.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 239 | 265 | 53.0 | - |
| SMART | SM00220 | serkin_6 | 657 | 933 | 6.2E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 657 | 931 | 37.163246 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 777 | 789 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 663 | 685 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.2 | - | 0 |
| RefSeq | XP_039853302.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 isoform X1 [Panicum virgatum] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9W2N6 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_08580 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology