Basic Information
Locus ID:
gene-QOZ80_8AG0620870
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 7918809 | 7921358 | - | gene-QOZ80_8AG0620870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 59,967.99 Da | 43.47 | 77.22 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 11 | 76 | 6.02E-10 | IPR036047 |
| SUPERFAMILY | SSF52058 | L domain-like | 155 | 476 | 3.03E-9 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 16 | 61 | 7.7E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 128 | 294 | 2.6E-6 | IPR032675 |
| SMART | SM00256 | fbox_2 | 23 | 62 | 9.0E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 17 | 53 | 9.364997 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 515 | 537 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 304 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 505 | 537 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44810.1 | F-box family protein. | 0 |
| RefSeq | XP_039853298.1 | uncharacterized protein LOC120711738 [Panicum virgatum] | 0 |
| O22232 | Putative F-box/LRR-repeat protein At3g44810 OS=Arabidopsis thaliana OX=3702 GN=At3g44810 PE=4 SV=2 | 0 | |
| TrEMBL | A0A5J9SBT7 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_58053 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology