Basic Information
Locus ID:
gene-QOZ80_8AG0620740
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 7702353 | 7706110 | - | gene-QOZ80_8AG0620740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.92 | 54,187.13 Da | 50.42 | 84.41 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 24 | 60 | 0.0038 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 12 | 64 | 6.67E-9 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 140 | 207 | 3.22E-8 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 20 | 72 | 9.4E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 95 | 209 | 2.9E-9 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 281 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 272 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60400.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_039815033.1 | uncharacterized protein LOC120677912 [Panicum virgatum] | 0 |
| Q1PFI4 | F-box protein At1g60400 OS=Arabidopsis thaliana OX=3702 GN=At1g60400 PE=2 SV=2 | 0 | |
| TrEMBL | A0A811PTW5 | F-box domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS31232 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology