Basic Information
Locus ID:
gene-QOZ80_8AG0620710
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 7678127 | 7681074 | - | gene-QOZ80_8AG0620710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 68,279.18 Da | 46.62 | 79.49 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 81 | 116 | 1.3E-5 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 216 | 287 | 1.26E-6 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 78 | 138 | 5.1E-12 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 186 | 294 | 3.0E-7 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 78 | 136 | 6.7E-8 | - |
| SMART | SM00256 | fbox_2 | 84 | 123 | 7.4E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 78 | 114 | 9.206031 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 77 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G38392.1 | - | 0 |
| RefSeq | XP_039853295.1 | uncharacterized protein LOC120711732 [Panicum virgatum] | 0 |
| Q9ZV94 | Putative F-box/FBD/LRR-repeat protein At1g78760 OS=Arabidopsis thaliana OX=3702 GN=At1g78760 PE=4 SV=1 | 0 | |
| TrEMBL | A0A8T0RAK6 | F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_6KG094800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology