Basic Information
Locus ID:
gene-QOZ80_8AG0620410
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 6570465 | 6572037 | + | gene-QOZ80_8AG0620410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.71 | 32,395.27 Da | 59.98 | 82.17 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 24 | 72 | 2.4E-11 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 108 | 239 | 7.26E-10 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 19 | 76 | 2.09E-8 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 87 | 262 | 7.0E-16 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 18 | 71 | 6.3E-10 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039817263.1 | putative F-box/LRR-repeat protein 23 isoform X1 [Panicum virgatum] | 0 |
| TrEMBL | A0A5J9W5H9 | F-box domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_09639 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 8 | AH08.560, AH08.563, BH08.599, BH08.609, BH08.611, CH06.2084 ... |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0620410, gene-QOZ80_8BG0648220 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_07G076300, gene-BS78_07G093000 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr20G010490 |
| Poaceae | Zea mays | 2 | Zm00001eb386430_P003, Zm00001eb386440_P001 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g23738 |