halophFGD

Basic Information

Locus ID: gene-QOZ80_8AG0620390

Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504

Genome Assembly: GCA_032690845.1

Description: F-box LRR-repeat protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr8A	6510783	6511124	+	gene-QOZ80_8AG0620390

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.63	12,406.09 Da	49.96	90.71	0.03

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF12937	F-box-like	20	66	8.4E-8	IPR001810
SUPERFAMILY	SSF81383	F-box domain	5	66	3.01E-10	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	13	66	5.0E-11	-
ProSiteProfiles	PS50181	F-box domain profile.	17	65	8.755626	IPR001810

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_039855369.1	putative F-box/LRR-repeat protein 22 [Panicum virgatum]	0
TrEMBL	A0A8T0RI47	F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_6KG300400 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	10	AH02.3531, AH08.564, BH02.3424, BH08.2212, BH08.597 ... BH08.607, CH02.2966, CH08.2399, CH08.709, CH08.711
Poaceae	Eleusine coracana subsp. coracana	15	gene-QOZ80_1AG0007090, gene-QOZ80_1BG0050140 ... gene-QOZ80_1BG0055810, gene-QOZ80_1BG0086270, gene-QOZ80_7BG0606530, gene-QOZ80_8AG0620370, gene-QOZ80_8AG0620390, gene-QOZ80_8BG0648100, gene-QOZ80_8BG0648110, gene-QOZ80_8BG0648130, gene-QOZ80_8BG0648140, gene-QOZ80_8BG0648150, gene-QOZ80_8BG0648250, gene-QOZ80_8BG0666090, gene-QOZ80_8BG0666100
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.3HG0319820.1.CDS1 ... HORVU.MOREX.r3.7HG0662550.1
Poaceae	Lolium multiflorum	11	gene-QYE76_009231, gene-QYE76_009232, gene-QYE76_009233 ... gene-QYE76_009331, gene-QYE76_017651, gene-QYE76_020633, gene-QYE76_027428, gene-QYE76_027429, gene-QYE76_027430, gene-QYE76_027431, gene-QYE76_027433
Poaceae	Puccinellia tenuiflora	6	Pt_Chr0205788, Pt_Chr0205789, Pt_Chr0207610, Pt_Chr0207611 ... Pt_Chr0405068, Pt_Chr0500250
Poaceae	Sporobolus alterniflorus	2	Chr20G001670, Chr20G010470
Poaceae	Thinopyrum elongatum	5	Tel3E01G785300, Tel6E01G283500, Tel7E01G327200 ... Tel7E01G327300, Tel7E01G327400
Poaceae	Triticum dicoccoides	1	gene_TRIDC6AG018010
Poaceae	Triticum aestivum	5	TraesCS3B02G537900.1, TraesCS3B02G538000.1 ... TraesCS3D02G483500.1, TraesCS6A02G133600.1, TraesCS7D02G109800.1
Poaceae	Zea mays	1	Zm00001eb386420_P001
Poaceae	Zoysia japonica	4	nbis-gene-31300, nbis-gene-38896, nbis-gene-48553 ... nbis-gene-48554
Poaceae	Zoysia macrostachya	2	Zma_g11315, Zma_g15927