Basic Information
Locus ID:
gene-QOZ80_8AG0619860
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 5926641 | 5930971 | + | gene-QOZ80_8AG0619860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 111,353.41 Da | 45.25 | 86.62 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 590 | 713 | 1.31031E-33 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 854 | 917 | 1.3E-4 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 592 | 740 | 8.8E-24 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 853 | 940 | 9.13E-7 | IPR016135 |
| SUPERFAMILY | SSF54495 | UBC-like | 581 | 756 | 1.48E-37 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 841 | 976 | 4.7E-27 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 550 | 807 | 1.1E-73 | IPR016135 |
| SMART | SM00212 | ubc_7 | 591 | 749 | 2.8E-22 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 588 | 749 | 34.903358 | IPR000608 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 523 | 543 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16920.1 | ubiquitin-conjugating enzyme 23. | 0 |
| RefSeq | XP_022681026.1 | probable ubiquitin-conjugating enzyme E2 23 [Setaria italica] | 0 |
| Q9ZVX1 | Probable ubiquitin-conjugating enzyme E2 23 OS=Arabidopsis thaliana OX=3702 GN=UBC23 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WKT4 | UBC core domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_00140 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 8 | gene-QOZ80_8AG0619840, gene-QOZ80_8AG0619860 ... |