Basic Information
Locus ID:
gene-QOZ80_8AG0619840
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 5866439 | 5869087 | + | gene-QOZ80_8AG0619840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.65 | 88,693.57 Da | 39.92 | 85.10 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 544 | 663 | 1.18915E-27 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 548 | 673 | 9.0E-20 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 534 | 710 | 7.74E-34 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 503 | 777 | 1.5E-69 | IPR016135 |
| SMART | SM00212 | ubc_7 | 545 | 703 | 2.4E-13 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 542 | 703 | 31.464321 | IPR000608 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33770.1 | phosphate 2. Encodes a ubiquitin-conjugating E2 enzyme. UBC24 mRNA accumulation is suppressed by miR399f, miR399b and miR399c. Involved in phosphate starvation response. | 0 |
| RefSeq | XP_022681026.1 | probable ubiquitin-conjugating enzyme E2 23 [Setaria italica] | 0 |
| Q8VY10 | Probable ubiquitin-conjugating enzyme E2 24 OS=Arabidopsis thaliana OX=3702 GN=UBC24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WKT4 | UBC core domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_00140 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 8 | gene-QOZ80_8AG0619840, gene-QOZ80_8AG0619860 ... |