Basic Information
Locus ID:
gene-QOZ80_8AG0619160
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 4876285 | 4877592 | + | gene-QOZ80_8AG0619160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.64 | 47,977.23 Da | 54.24 | 76.97 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16448 | RING-H2 | 384 | 424 | 2.7585E-8 | - |
| Pfam | PF13639 | Ring finger domain | 383 | 424 | 6.0E-9 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 383 | 429 | 1.55E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 364 | 431 | 3.1E-12 | IPR013083 |
| SMART | SM00184 | ring_2 | 384 | 423 | 4.2E-4 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 384 | 424 | 11.279532 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 351 | 372 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 122 | 138 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 164 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_035819143.1 | uncharacterized protein LOC103642511 [Zea mays] | 0 |
| TrEMBL | A0A5J9W516 | RING-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_09457 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology