Basic Information
Locus ID:
gene-QOZ80_8AG0617850
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 3353751 | 3354808 | - | gene-QOZ80_8AG0617850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 26,523.70 Da | 63.10 | 77.58 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 22 | 147 | 2.74265E-23 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 176 | 224 | 3.5E-10 | IPR000210 |
| Pfam | PF00917 | MATH domain | 40 | 147 | 2.0E-6 | IPR002083 |
| SUPERFAMILY | SSF54695 | POZ domain | 163 | 220 | 1.49E-13 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 18 | 153 | 3.11E-29 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 19 | 150 | 1.0E-24 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 161 | 231 | 9.3E-15 | IPR011333 |
| SMART | SM00061 | math_3 | 25 | 130 | 8.3E-5 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 20 | 146 | 21.950682 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 186 | 231 | 11.047234 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.2 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_039771080.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0RBG3 | BTB/POZ and MATH domain-containing protein 1 OS=Panicum virgatum OX=38727 GN=PVAP13_6KG213600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | CH08.879 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_6AG0509720, gene-QOZ80_8AG0617850 ... |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_032442 |
| Poaceae | Oryza coarctata | 1 | Oco16G004250 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G926700, Tel2E01G926900 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC2AG075810, gene_TRIDC2AG075860 ... |
| Poaceae | Triticum aestivum | 9 | TraesCS2A02G543300.1.cds1, TraesCS2A02G543600.1.cds1 ... |
| Poaceae | Zoysia macrostachya | 1 | Zma_g22657 |