halophFGD

Basic Information

Locus ID: gene-QOZ80_8AG0615000

Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504

Genome Assembly: GCA_032690845.1

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr8A	660626	661669	-	gene-QOZ80_8AG0615000

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.84	38,914.60 Da	40.04	86.28	-0.30

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00646	F-box domain	24	57	3.2E-5	IPR001810
SUPERFAMILY	SSF81383	F-box domain	22	77	1.83E-9	IPR036047
SUPERFAMILY	SSF52047	RNI-like	202	322	2.12E-8	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	148	341	8.0E-8	IPR032675
Gene3D	G3DSA:1.20.1280.50	-	8	60	4.4E-6	-
ProSiteProfiles	PS50181	F-box domain profile.	21	68	10.504256	IPR001810
MobiDBLite	mobidb-lite	consensus disorder prediction	89	107	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	22	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	83	110	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G80960.5	-
RefSeq	XP_002443737.1	uncharacterized protein LOC8068547 [Sorghum bicolor]
Swiss-Prot	Q9SAG4	F-box protein At1g80960 OS=Arabidopsis thaliana OX=3702 GN=At1g80960 PE=2 SV=3
TrEMBL	A0A5J9W8J0	F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_10198 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	6	BH07.3820, BH07.3821, CH07.3879, CH07.3880, CH07.3882 ... CH09.1689
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_2AG0151080, gene-QOZ80_4AG0313050 ... gene-QOZ80_8AG0615000, gene-QOZ80_8AG0615050
Poaceae	Hordeum vulgare	38	HORVU.MOREX.r3.1HG0025200.1, HORVU.MOREX.r3.2HG0105200.1 ... HORVU.MOREX.r3.2HG0114700.1, HORVU.MOREX.r3.2HG0114880.1, HORVU.MOREX.r3.2HG0168360.1.CDS1, HORVU.MOREX.r3.2HG0168370.1, HORVU.MOREX.r3.4HG0334320.1, HORVU.MOREX.r3.6HG0558490.1.CDS1, HORVU.MOREX.r3.6HG0558500.1, HORVU.MOREX.r3.6HG0565400.1, HORVU.MOREX.r3.6HG0569940.1, HORVU.MOREX.r3.6HG0595870.1, HORVU.MOREX.r3.6HG0595890.1.CDS1, HORVU.MOREX.r3.6HG0597570.1, HORVU.MOREX.r3.6HG0597580.1, HORVU.MOREX.r3.6HG0617540.1, HORVU.MOREX.r3.6HG0617560.1, HORVU.MOREX.r3.6HG0621060.1, HORVU.MOREX.r3.6HG0623530.1, HORVU.MOREX.r3.6HG0624120.1, HORVU.MOREX.r3.6HG0624130.1, HORVU.MOREX.r3.6HG0624150.1, HORVU.MOREX.r3.6HG0624160.1, HORVU.MOREX.r3.6HG0624180.1, HORVU.MOREX.r3.6HG0624200.1, HORVU.MOREX.r3.6HG0626380.1, HORVU.MOREX.r3.6HG0630270.1, HORVU.MOREX.r3.6HG0630280.1, HORVU.MOREX.r3.6HG0630340.1, HORVU.MOREX.r3.6HG0630680.1, HORVU.MOREX.r3.6HG0631830.1, HORVU.MOREX.r3.6HG0631850.1, HORVU.MOREX.r3.6HG0631900.1, HORVU.MOREX.r3.6HG0631930.1, HORVU.MOREX.r3.6HG0631940.1.CDS1, HORVU.MOREX.r3.6HG0631950.1, HORVU.MOREX.r3.7HG0670060.1, HORVU.MOREX.r3.7HG0670080.1
Poaceae	Lolium multiflorum	45	gene-QYE76_004096, gene-QYE76_007517, gene-QYE76_012696 ... gene-QYE76_017907, gene-QYE76_019078, gene-QYE76_024287, gene-QYE76_026112, gene-QYE76_026355, gene-QYE76_026528, gene-QYE76_026531, gene-QYE76_026876, gene-QYE76_026877, gene-QYE76_026878, gene-QYE76_026879, gene-QYE76_026882, gene-QYE76_026883, gene-QYE76_026884, gene-QYE76_026885, gene-QYE76_026886, gene-QYE76_026889, gene-QYE76_026892, gene-QYE76_026895, gene-QYE76_026898, gene-QYE76_027942, gene-QYE76_035244, gene-QYE76_035445, gene-QYE76_035871, gene-QYE76_035874, gene-QYE76_037144, gene-QYE76_037772, gene-QYE76_037773, gene-QYE76_037775, gene-QYE76_037776, gene-QYE76_040454, gene-QYE76_045612, gene-QYE76_048345, gene-QYE76_049668, gene-QYE76_049690, gene-QYE76_052107, gene-QYE76_055844, gene-QYE76_055845, gene-QYE76_056792, gene-QYE76_058492, gene-QYE76_069059, gene-QYE76_071113
Poaceae	Oryza coarctata	8	Oco03G025920, Oco03G025960, Oco04G026270, Oco04G026400 ... Oco04G026440, Oco04G026450, Oco07G008910, Oco08G008850
Poaceae	Oryza sativa	18	LOC_Os02g48300.1, LOC_Os02g54550.1, LOC_Os02g55050.1 ... LOC_Os02g57860.1, LOC_Os02g57870.1, LOC_Os02g57880.1, LOC_Os02g57890.1, LOC_Os02g57910.1, LOC_Os02g57940.1, LOC_Os02g57960.1, LOC_Os02g57965.1, LOC_Os02g58040.1, LOC_Os04g40760.1, LOC_Os04g40770.1, LOC_Os04g40780.1, LOC_Os04g40800.1, LOC_Os04g40960.1, LOC_Os05g01630.1
Poaceae	Paspalum vaginatum	2	gene-BS78_07G197900, gene-BS78_K113400
Poaceae	Puccinellia tenuiflora	43	Pt_Chr0101770, Pt_Chr0107087, Pt_Chr0107530, Pt_Chr0200849 ... Pt_Chr0202928, Pt_Chr0202963, Pt_Chr0202967, Pt_Chr0206868, Pt_Chr0305396, Pt_Chr0305398, Pt_Chr0307231, Pt_Chr0400814, Pt_Chr0400815, Pt_Chr0400816, Pt_Chr0400817, Pt_Chr0601234, Pt_Chr0603652, Pt_Chr0604297, Pt_Chr0604354, Pt_Chr0604439, Pt_Chr0604447, Pt_Chr0604448, Pt_Chr0604510, Pt_Chr0604605, Pt_Chr0604606, Pt_Chr0604627, Pt_Chr0604687, Pt_Chr0604696, Pt_Chr0604701, Pt_Chr0604706, Pt_Chr0604731, Pt_Chr0604737, Pt_Chr0604739, Pt_Chr0604744, Pt_Chr0604868, Pt_Chr0605582, Pt_Chr0605674, Pt_Chr0605677, Pt_Chr0605679, Pt_Chr0605681, Pt_Chr0605683, Pt_Chr0704415, Pt_Ctg00197
Poaceae	Thinopyrum elongatum	31	Tel2E01G143700, Tel2E01G143800, Tel2E01G563900 ... Tel2E01G595100, Tel2E01G942600, Tel2E01G943300, Tel3E01G455800, Tel3E01G455900, Tel5E01G002500, Tel5E01G559800, Tel6E01G136100, Tel6E01G136500, Tel6E01G254500, Tel6E01G265100, Tel6E01G285500, Tel6E01G311500, Tel6E01G566900, Tel6E01G636100, Tel6E01G636300, Tel6E01G716300, Tel6E01G716500, Tel6E01G716600, Tel6E01G716700, Tel6E01G717200, Tel6E01G717600, Tel6E01G749400, Tel6E01G750100, Tel6E01G751000, Tel7E01G429800, Tel7E01G430000, Tel7E01G717600
Poaceae	Triticum dicoccoides	54	gene_TRIDC1AG009610, gene_TRIDC1BG012920 ... gene_TRIDC2AG047050, gene_TRIDC2AG056290, gene_TRIDC2BG084660, gene_TRIDC3BG026460, gene_TRIDC3BG046280, gene_TRIDC4AG059300, gene_TRIDC5AG009660, gene_TRIDC5AG031100, gene_TRIDC5BG009830, gene_TRIDC5BG013230, gene_TRIDC5BG031390, gene_TRIDC6AG006830, gene_TRIDC6AG015090, gene_TRIDC6AG017380, gene_TRIDC6AG018230, gene_TRIDC6AG020090, gene_TRIDC6AG020990, gene_TRIDC6AG048000, gene_TRIDC6AG051070, gene_TRIDC6AG051110, gene_TRIDC6AG053650, gene_TRIDC6AG058480, gene_TRIDC6AG058490, gene_TRIDC6AG058500, gene_TRIDC6AG058510, gene_TRIDC6AG058540, gene_TRIDC6AG058860, gene_TRIDC6AG059710, gene_TRIDC6BG009700, gene_TRIDC6BG026850, gene_TRIDC6BG055250, gene_TRIDC6BG056000, gene_TRIDC6BG059830, gene_TRIDC6BG059880, gene_TRIDC6BG062520, gene_TRIDC6BG062590, gene_TRIDC6BG069340, gene_TRIDC6BG069380, gene_TRIDC6BG069400, gene_TRIDC6BG069410, gene_TRIDC6BG070690, gene_TRIDC6BG070710, gene_TRIDC6BG070730, gene_TRIDC6BG070740, gene_TRIDC6BG070760, gene_TRIDC6BG070850, gene_TRIDC6BG070860, gene_TRIDC6BG070870, gene_TRIDC6BG070880, gene_TRIDC7AG031140, gene_TRIDC7AG060020, gene_TRIDC7BG052800
Poaceae	Triticum aestivum	130	TraesCS1A02G069800.1, TraesCS1B02G088100.1 ... TraesCS1B02G091100.2, TraesCS2A02G064500.1, TraesCS2A02G342200.2, TraesCS2A02G344700.1, TraesCS2A02G390300.3, TraesCS2B02G242700.1, TraesCS2B02G361600.1, TraesCS2D02G320100.3, TraesCS2D02G320400.3, TraesCS2D02G323200.1, TraesCS2D02G388300.1, TraesCS2D02G554600.1, TraesCS3B02G184000.2, TraesCS3B02G310200.1, TraesCS3B02G360200.1, TraesCS3B02G439300.1, TraesCS3D02G323600.1, TraesCS3D02G401000.1, TraesCS4A02G289800.1, TraesCS4A02G383200.1, TraesCS4B02G024600.1, TraesCS5A02G062000.1, TraesCS5A02G192600.1, TraesCS5B02G059500.1, TraesCS5B02G059600.1, TraesCS5B02G080800.2, TraesCS5B02G181000.1, TraesCS5B02G181100.1, TraesCS5B02G351400.1, TraesCS5D02G356400.1, TraesCS6A02G129200.1, TraesCS6A02G129300.1, TraesCS6A02G135400.1, TraesCS6A02G146300.2, TraesCS6A02G319400.1, TraesCS6A02G340700.1, TraesCS6A02G341200.1, TraesCS6A02G358200.1, TraesCS6A02G358300.1, TraesCS6A02G396600.1, TraesCS6A02G396700.1, TraesCS6A02G396800.1, TraesCS6A02G396900.1, TraesCS6A02G397000.1, TraesCS6A02G397400.1, TraesCS6A02G397500.1, TraesCS6A02G397600.1, TraesCS6A02G397700.1, TraesCS6A02G400400.1, TraesCS6A02G406800.2, TraesCS6A02G406900.1, TraesCS6A02G407000.1, TraesCS6A02G407100.1, TraesCS6A02G407600.1, TraesCS6A02G407800.1, TraesCS6A02G407900.2, TraesCS6A02G408000.1, TraesCS6A02G408100.1, TraesCS6B02G073800.1, TraesCS6B02G112600.1, TraesCS6B02G142200.1, TraesCS6B02G143900.1, TraesCS6B02G157500.1, TraesCS6B02G163400.1, TraesCS6B02G179300.2, TraesCS6B02G344800.1, TraesCS6B02G349900.1, TraesCS6B02G372200.1, TraesCS6B02G372500.1, TraesCS6B02G390700.1, TraesCS6B02G390800.1, TraesCS6B02G390900.1, TraesCS6B02G391000.1, TraesCS6B02G436600.1, TraesCS6B02G436900.1, TraesCS6B02G437000.2, TraesCS6B02G437100.1, TraesCS6B02G437200.1, TraesCS6B02G437500.1, TraesCS6B02G440700.1, TraesCS6B02G451500.1, TraesCS6B02G451600.1, TraesCS6B02G451700.1, TraesCS6B02G451800.1, TraesCS6B02G451900.1, TraesCS6B02G452000.1, TraesCS6B02G452200.1, TraesCS6B02G452300.1, TraesCS6B02G452400.1, TraesCS6B02G452600.1, TraesCS6B02G452900.1, TraesCS6B02G453000.1, TraesCS6B02G453100.1, TraesCS6B02G453200.1, TraesCS6B02G453300.1, TraesCS6B02G453500.1, TraesCS6B02G453700.1, TraesCS6B02G453800.1, TraesCS6B02G453900.1, TraesCS6B02G454000.1, TraesCS6D02G104900.1, TraesCS6D02G124500.2, TraesCS6D02G141200.3, TraesCS6D02G304700.1, TraesCS6D02G321400.2, TraesCS6D02G340800.1, TraesCS6D02G340900.1, TraesCS6D02G341000.1, TraesCS6D02G341100.1, TraesCS6D02G381400.1, TraesCS6D02G381500.1, TraesCS6D02G381700.1, TraesCS6D02G381800.2, TraesCS6D02G384600.1, TraesCS6D02G390300.1, TraesCS6D02G390600.1, TraesCS6D02G390800.1, TraesCS6D02G391000.1, TraesCS6D02G391100.1, TraesCS6D02G391500.1, TraesCS6D02G391700.1, TraesCS6D02G391800.1, TraesCS6D02G391900.1, TraesCS7A02G084700.1, TraesCS7A02G243600.1, TraesCS7B02G329700.1, TraesCS7D02G421700.1, TraesCSU02G141900.1
Poaceae	Zoysia japonica	1	nbis-gene-8304
Poaceae	Zoysia macrostachya	2	Zma_g14714, Zma_g14715