Basic Information
Locus ID:
gene-QOZ80_8AG0614740
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8A | 506001 | 510203 | + | gene-QOZ80_8AG0614740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 77,545.11 Da | 43.31 | 74.74 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 191 | 689 | 3.8E-37 | IPR001394 |
| SUPERFAMILY | SSF57850 | RING/U-box | 48 | 158 | 1.29E-6 | - |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 188 | 691 | 9.81E-64 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 186 | 694 | 1.1E-65 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 45 | 171 | 5.2E-8 | IPR013083 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 190 | 692 | 36.555531 | IPR028889 |
| ProSiteProfiles | PS50271 | Zinc finger UBP-type profile. | 83 | 155 | 11.480234 | IPR001607 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 191 | 206 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 342 | 363 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 502 | 522 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 342 | 378 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32780.1 | ubiquitin-specific protease 1. | 0 |
| RefSeq | XP_022683291.1 | ubiquitin carboxyl-terminal hydrolase 2 [Setaria italica] | 0 |
| Q9FPT5 | Ubiquitin carboxyl-terminal hydrolase 1 OS=Arabidopsis thaliana OX=3702 GN=UBP1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9W8M8 | USP domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_10241 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology