Basic Information
Locus ID:
gene-QOZ80_7BG0613880
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7B | 58772715 | 58774370 | + | gene-QOZ80_7BG0613880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.93 | 45,279.86 Da | 42.18 | 88.29 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02005 | TPP_PDC_IPDC | 223 | 405 | 4.31435E-86 | - |
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 22 | 137 | 9.87908E-72 | - |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 268 | 392 | 2.3E-13 | IPR011766 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 18 | 122 | 2.9E-29 | IPR012001 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 223 | 416 | 2.14E-38 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 18 | 135 | 2.5E-34 | IPR029061 |
| Gene3D | G3DSA:3.40.50.970 | - | 216 | 407 | 1.4E-53 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 15 | 142 | 9.9E-46 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G54960.1 | pyruvate decarboxylase-2. pyruvate decarboxylase-2 | 0 |
| RefSeq | XP_039828800.1 | pyruvate decarboxylase 2 [Panicum virgatum] | 0 |
| A2XFI3 | Pyruvate decarboxylase 2 OS=Oryza sativa subsp. indica OX=39946 GN=PDC2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A453AK47 | pyruvate decarboxylase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology