Basic Information
Locus ID:
gene-QOZ80_7BG0611260
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
RhoGAP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7B | 57084638 | 57091892 | + | gene-QOZ80_7BG0611260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 94,049.12 Da | 52.93 | 81.23 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00821 | PH | 29 | 128 | 5.62587E-12 | - |
| CDD | cd00159 | RhoGAP | 189 | 328 | 2.17568E-34 | - |
| Pfam | PF00169 | PH domain | 28 | 132 | 4.6E-12 | IPR001849 |
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 606 | 686 | 1.5E-21 | IPR025757 |
| Pfam | PF00620 | RhoGAP domain | 189 | 333 | 6.5E-31 | IPR000198 |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 189 | 382 | 1.55E-33 | IPR008936 |
| SUPERFAMILY | SSF50729 | PH domain-like | 22 | 141 | 1.32E-17 | - |
| Gene3D | G3DSA:2.30.29.30 | - | 16 | 134 | 7.3E-17 | IPR011993 |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 159 | 382 | 9.3E-42 | IPR008936 |
| SMART | SM00324 | RhoGAP_3 | 186 | 377 | 6.2E-28 | IPR000198 |
| SMART | SM00233 | PH_update | 27 | 135 | 1.9E-15 | IPR001849 |
| ProSiteProfiles | PS50003 | PH domain profile. | 26 | 133 | 15.5034 | IPR001849 |
| ProSiteProfiles | PS50238 | Rho GTPase-activating proteins domain profile. | 180 | 380 | 30.474627 | IPR000198 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 390 | 409 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 750 | 772 | - | - |
| Coils | Coil | Coil | 596 | 630 | - | - |
| Coils | Coil | Coil | 809 | 829 | - | - |
| Coils | Coil | Coil | 669 | 689 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19390.1 | Rho GTPase activation protein (RhoGAP) with PH domain. Encodes a protein with similarity to REN1, a Rho GTPase activating protein. | 0 |
| RefSeq | XP_004958566.1 | rho GTPase-activating protein 7 isoform X4 [Setaria italica] | 0 |
| Q8RWQ4 | Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1 | 0 | |
| TrEMBL | K3ZQL8 | Rho GTPase-activating protein 7-like OS=Setaria italica OX=4555 GN=101765349 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology