Basic Information
Locus ID:
gene-QOZ80_7BG0608750
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7B | 55511414 | 55515639 | + | gene-QOZ80_7BG0608750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 77,861.95 Da | 42.80 | 82.11 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 66 | 1.3E-7 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 420 | 686 | 4.9E-39 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 116 | 136 | 1.1 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 156 | 198 | 2.4E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 395 | 686 | 1.26E-67 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 25 | 243 | 5.53E-40 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 254 | 6.8E-48 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 377 | 492 | 3.5E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 493 | 712 | 3.1E-56 | - |
| SMART | SM00369 | LRR_typ_2 | 91 | 120 | 44.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 185 | 208 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 138 | 160 | 3.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 161 | 184 | 370.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 415 | 689 | 33.700417 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 140 | 161 | 7.827466 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 421 | 444 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 698 | 715 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 694 | 715 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 261 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 284 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 278 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_004958321.1 | protein STRUBBELIG-RECEPTOR FAMILY 7 [Setaria italica] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VQQ7 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_11254 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology