halophFGD

Basic Information

Locus ID: gene-QOZ80_7BG0605530

Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504

Genome Assembly: GCA_032690845.1

Description: Belongs to the ubiquitin-conjugating enzyme family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr7B	53141429	53142406	+	gene-QOZ80_7BG0605530

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.10	37,535.09 Da	61.70	51.66	-1.30

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	162	229	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	162	217	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	86	111	-	-
Coils	Coil	Coil	197	217	-	-

KEGG Pathway

KO Term:

K20217 (ubiquitin-conjugating enzyme E2 E [EC:2.3.2.23])

Pathway:

ko04120 (Ubiquitin mediated proteolysis) map04120 (Ubiquitin mediated proteolysis)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	NP_001132884.1	uncharacterized protein LOC100194378 [Zea mays]	0
TrEMBL	A0A5J9VRQ3	UBC core domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_11610 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	5	AH03.3479, BH03.3693, CH03.3658, CH03.3896, CH03.3900
Poaceae	Eleusine coracana subsp. coracana	2	gene-QOZ80_7AG0574250, gene-QOZ80_7BG0605530
Poaceae	Hordeum vulgare	1	HORVU.MOREX.r3.2HG0131570.1.CDS1
Poaceae	Oryza coarctata	3	Oco13G002330, Oco13G010850, Oco14G011590
Poaceae	Oryza sativa	2	LOC_Os07g07820.1, LOC_Os07g38950.1
Poaceae	Paspalum vaginatum	1	gene-BS78_02G326200
Poaceae	Sporobolus alterniflorus	4	Chr19G003650, Chr24G011010, Chr27G013620, Chr28G010240
Poaceae	Triticum dicoccoides	2	gene_TRIDC2AG023840, gene_TRIDC2BG029300
Poaceae	Triticum aestivum	2	TraesCS2A02G187100.1.cds1, TraesCS2D02G200800.1.cds1
Poaceae	Zea mays	2	Zm00001eb107550_P001, Zm00001eb325390_P001
Poaceae	Zoysia japonica	2	nbis-gene-10513, nbis-gene-606
Poaceae	Zoysia macrostachya	2	Zma_g5419, Zma_g6711