Basic Information
Locus ID:
gene-QOZ80_7BG0604820
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Sugar (and other) transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7B | 52626543 | 52632653 | + | gene-QOZ80_7BG0604820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.23 | 47,270.54 Da | 42.20 | 102.62 | 0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07690 | Major Facilitator Superfamily | 235 | 368 | 1.9E-11 | IPR011701 |
| Pfam | PF00083 | Sugar (and other) transporter | 68 | 217 | 8.8E-28 | IPR005828 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 17 | 368 | 2.35E-54 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 27 | 218 | 9.8E-46 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 219 | 370 | 1.4E-22 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 32 | 442 | 28.306898 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 86 | 103 | - | IPR005829 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 243 | 258 | - | IPR005829 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 435 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 406 | 442 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13050.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_039831486.1 | organic cation/carnitine transporter 7-like isoform X2 [Panicum virgatum] | 0 |
| Q940M4 | Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana OX=3702 GN=OCT7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2S3H3H6 | MFS domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_2G418700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology