Basic Information
Locus ID:
gene-QOZ80_7BG0602400
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7B | 50041485 | 50045685 | + | gene-QOZ80_7BG0602400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.49 | 50,628.50 Da | 38.06 | 88.96 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 92 | 180 | 1.1E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 6 | 64 | 8.8E-13 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 295 | 448 | 3.5E-33 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 272 | 463 | 4.32E-55 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 77 | 184 | 5.1E-20 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 253 | 373 | 4.8E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 374 | 463 | 6.3E-25 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 1 | 66 | 2.9E-15 | IPR038408 |
| SMART | SM00220 | serkin_6 | 293 | 461 | 2.4E-8 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 293 | 463 | 31.382439 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 77 | 184 | 17.38501 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1 | 67 | 14.334451 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 419 | 431 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.3 | - | 0 |
| RefSeq | XP_015694662.2 | cysteine-rich receptor-like protein kinase 10, partial [Oryza brachyantha] | 0 |
| Q0D5R3 | Cysteine-rich receptor-like protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VUZ5 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_12881 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_7AG0570730, gene-QOZ80_7BG0602400 |