Basic Information
Locus ID:
gene-QOZ80_7BG0602090
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7B | 49685485 | 49688360 | + | gene-QOZ80_7BG0602090 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 76,242.46 Da | 42.73 | 81.51 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 371 | 637 | 2.57421E-96 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 185 | 256 | 4.8E-8 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 368 | 636 | 1.3E-48 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 31 | 128 | 3.3E-17 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 343 | 637 | 7.55E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 340 | 440 | 4.1E-37 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 148 | 258 | 5.3E-17 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 23 | 132 | 9.7E-24 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 441 | 643 | 1.4E-59 | - |
| SMART | SM00220 | serkin_6 | 365 | 637 | 4.4E-34 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 26 | 132 | 20.779547 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 365 | 637 | 38.166759 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 149 | 258 | 16.380226 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 486 | 498 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 673 | 687 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 660 | 687 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23280.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 20. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_004957923.2 | uncharacterized protein LOC101782077 [Setaria italica] | 0 |
| O65479 | Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=CRK20 PE=2 SV=2 | 0 | |
| TrEMBL | A0A368Q6N9 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_2G340600v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH03.3243, BH03.3430, CH03.3635, CH03.3636 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_7AG0570270, gene-QOZ80_7AG0570320 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0139040.1, HORVU.MOREX.r3.7HG0638110.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_040820, gene-QYE76_040848 |
| Poaceae | Oryza coarctata | 2 | Oco13G009240, Oco14G009630 |
| Poaceae | Oryza sativa | 1 | LOC_Os07g35140.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G301000 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0304253 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr19G005260, Chr27G012000 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G1046700, Tel2E01G404800 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG028890, gene_TRIDC2BG032550 |
| Poaceae | Triticum aestivum | 7 | TraesCS2A02G217200.1, TraesCS2A02G562800.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb323230_P001, Zm00001eb323240_P003 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-819 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g6572 |