HalophFGD

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Basic Information
Locus ID: gene-QOZ80_7BG0601840
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr7B 49277078 49278334 + gene-QOZ80_7BG0601840
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.57 47,023.36 Da 41.71 81.53 -0.18
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 25 61 3.3E-9 IPR001810
SUPERFAMILY SSF81383 F-box domain 25 97 2.09E-12 IPR036047
Gene3D G3DSA:1.20.1280.50 - 22 64 2.1E-8 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_025801480.1 uncharacterized protein LOC112880973 [Panicum hallii] 0
TrEMBL A0A5J9THS3 F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_44474 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 10 AH03.1463, BH01.2915, BH03.1162, BH03.1163, BH03.1222 ...
BH03.1611, BH05.3348, CH03.1307, CH03.1766, CH05.3458
Poaceae Eleusine coracana subsp. coracana 4 gene-QOZ80_5AG0391960, gene-QOZ80_5BG0439100 ...
gene-QOZ80_7AG0570010, gene-QOZ80_7BG0601840
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.3HG0280310.1.CDS1
Poaceae Lolium multiflorum 5 gene-QYE76_054582, gene-QYE76_054583, gene-QYE76_062775 ...
gene-QYE76_065224, gene-QYE76_065386
Poaceae Oryza coarctata 2 Oco04G000820, Oco17G001180
Poaceae Oryza sativa 2 LOC_Os09g06620.1, LOC_Os09g06660.1
Poaceae Paspalum vaginatum 2 gene-BS78_04G067400, gene-BS78_10G249300
Poaceae Sporobolus alterniflorus 2 Chr06G015230, Chr27G011900
Poaceae Thinopyrum elongatum 4 Tel1E01G554700, Tel1E01G554800, Tel3E01G443100 ...
Tel7E01G258100
Poaceae Triticum dicoccoides 3 gene_TRIDC3AG039780, gene_TRIDC3BG044880 ...
gene_TRIDC7AG015240
Poaceae Triticum aestivum 10 TraesCS1A02G344200.1, TraesCS1B02G357300.1 ...
TraesCS1B02G358000.1.cds1, TraesCS1D02G346600.1.cds1, TraesCS3A02G267200.1.cds1, TraesCS3B02G300700.1.cds1, TraesCS3D02G267400.1.cds1, TraesCS7B02G030200.1.cds1, TraesCS7D02G129200.1.cds1, TraesCS7D02G129400.1
Poaceae Zoysia japonica 1 nbis-gene-12564
Poaceae Zoysia macrostachya 1 Zma_g25781
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.