Basic Information
Locus ID:
gene-QOZ80_7BG0600130
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7B | 46762361 | 46767632 | + | gene-QOZ80_7BG0600130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.17 | 57,296.01 Da | 40.53 | 90.11 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 47 | 382 | 9.7E-60 | IPR000490 |
| Pfam | PF07983 | X8 domain | 400 | 471 | 4.8E-21 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 47 | 382 | 2.19E-74 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 394 | 503 | 1.9E-12 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 46 | 387 | 1.1E-98 | - |
| SMART | SM00768 | X8_cls | 399 | 484 | 2.0E-50 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_014660268.1 | glucan endo-1,3-beta-glucosidase 1 [Setaria italica] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | K3ZS68 | X8 domain-containing protein OS=Setaria italica OX=4555 GN=106804114 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology