Basic Information
Locus ID:
gene-QOZ80_7BG0593110
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
UBX domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7B | 17778906 | 17780396 | - | gene-QOZ80_7BG0593110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 54,272.97 Da | 59.81 | 66.51 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14273 | UBA_TAP-C_like | 9 | 40 | 2.15235E-9 | - |
| CDD | cd02958 | UAS | 191 | 313 | 1.20102E-28 | - |
| Pfam | PF14555 | UBA-like domain | 5 | 44 | 1.2E-10 | - |
| Pfam | PF13899 | Thioredoxin-like | 198 | 284 | 4.7E-10 | - |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 386 | 493 | 1.76E-8 | IPR029071 |
| SUPERFAMILY | SSF52833 | Thioredoxin-like | 172 | 313 | 7.6E-22 | IPR036249 |
| SUPERFAMILY | SSF46934 | UBA-like | 5 | 40 | 7.4E-5 | IPR009060 |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin | 193 | 314 | 7.8E-25 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 2 | 43 | 1.2E-7 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 315 | 494 | 3.4E-6 | - |
| SMART | SM00594 | 45neu3 | 179 | 308 | 5.9E-7 | IPR006577 |
| ProSiteProfiles | PS50033 | UBX domain profile. | 414 | 493 | 13.584146 | IPR001012 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 362 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 160 | 179 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 148 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 120 | 148 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 111 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 322 | 377 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 324 | 338 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_020148694.1 | plant UBX domain-containing protein 7-like [Aegilops tauschii subsp. strangulata] | 0 |
| TrEMBL | A0A5J9VT64 | UBX domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_13059 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 5 | AH03.861, AH07.2773, BH03.985, BH07.2584, CH07.2650 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2AG0138910, gene-QOZ80_2BG0194560 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0117420.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 6 | gene-QYE76_007415, gene-QYE76_023963, gene-QYE76_023966 ... |
| Poaceae | Oryza coarctata | 3 | Oco04G017190, Oco13G005150, Oco14G006110 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g42800.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G208100 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr06G013060, Chr09G024940, Chr09G024970, Chr15G015460 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2BG020080, gene_TRIDC6AG036470 |
| Poaceae | Triticum aestivum | 5 | TraesCS2A02G133200.1.cds1, TraesCS2B02G156700.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb185740_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-27667, nbis-gene-9357 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g13983 |