Basic Information
Locus ID:
gene-QOZ80_7BG0591040
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7B | 9592880 | 9594316 | + | gene-QOZ80_7BG0591040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.86 | 46,625.24 Da | 51.28 | 91.52 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 31 | 71 | 1.0E-4 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 142 | 333 | 2.43E-11 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 30 | 93 | 1.23E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 32 | 71 | 3.8E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 88 | 368 | 1.2E-9 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 29 | 76 | 10.530751 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_040382010.1 | FBD-associated F-box protein At3g52670-like [Oryza brachyantha] | 0 |
| TrEMBL | A0A3L6PN83 | FBD domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM14G10040 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH08.1101, CH08.1212 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_7BG0591040, gene-QOZ80_7BG0591060 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr19G016940, Chr24G000100 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-38250, nbis-gene-54026 |