Basic Information
Locus ID:
gene-QOZ80_7BG0590780
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
rRNA N-glycosidase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7B | 8767086 | 8767952 | - | gene-QOZ80_7BG0590780 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 31,626.67 Da | 37.08 | 88.75 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00161 | Ribosome inactivating protein | 40 | 236 | 5.3E-53 | IPR001574 |
| SUPERFAMILY | SSF56371 | Ribosome inactivating proteins (RIP) | 33 | 270 | 1.44E-50 | IPR036041 |
| Gene3D | G3DSA:4.10.470.10 | Ricin (A Subunit), domain 2 | 194 | 288 | 4.6E-31 | IPR016139 |
| Gene3D | G3DSA:3.40.420.10 | Ricin (A subunit), domain 1 | 26 | 193 | 6.9E-52 | IPR016138 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 91 | 106 | 7.4E-9 | IPR017989 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 42 | 55 | 7.4E-9 | IPR017989 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 219 | 236 | 7.4E-9 | IPR017989 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 182 | 202 | 7.4E-9 | IPR017989 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_040385856.1 | protein synthesis inhibitor II-like [Oryza brachyantha] | 0 |
| P22244 | Protein synthesis inhibitor I OS=Hordeum vulgare OX=4513 GN=RIP30 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1E5VQL8 | rRNA N-glycosylase OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0011580 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology