Basic Information
Locus ID:
gene-QOZ80_7BG0589990
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7B | 7454664 | 7460445 | + | gene-QOZ80_7BG0589990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 41,629.48 Da | 41.99 | 87.25 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 159 | 191 | 0.16 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 126 | 148 | 0.024 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 70 | 317 | 4.19E-32 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 28 | 331 | 3.8E-43 | IPR015943 |
| SMART | SM00320 | WD40_4 | 153 | 191 | 0.19 | IPR001680 |
| SMART | SM00320 | WD40_4 | 59 | 100 | 65.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 242 | 281 | 51.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 194 | 239 | 290.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 114 | 149 | 0.4 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G52190.1 | phosphate transporter traffic facilitator1. Encodes a plant specific protein structurally related to the SEC12 proteins of the early secretory pathway. Mutation of PHF1 impairs Pi transport. Expression was detected in all tissues, and was induced by Pi starvation. Localized in endoplasmic reticulum (ER), and mutation of PHF1 resulted in ER retention and reduced accumulation of the plasma membrane PHT1;1 transporter. | 0 |
| RefSeq | XP_015647566.1 | SEC12-like protein 1 [Oryza sativa Japonica Group] | 0 |
| Q8GYE0 | SEC12-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PHF1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9VZX9 | WD_REPEATS_REGION domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_14722 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology