Basic Information
Locus ID:
gene-QOZ80_7BG0588310
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
TPL-binding domain in jasmonate signalling
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7B | 4915066 | 4921520 | + | gene-QOZ80_7BG0588310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.43 | 157,564.77 Da | 40.11 | 69.19 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04301 | NAT_SF | 934 | 994 | 0.00102515 | - |
| CDD | cd15532 | PHD2_CHD_II | 744 | 782 | 2.46562E-17 | - |
| Pfam | PF00628 | PHD-finger | 744 | 784 | 1.6E-7 | IPR019787 |
| Pfam | PF16135 | Tify domain binding domain | 666 | 716 | 2.0E-17 | IPR032308 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 929 | 1014 | 2.71E-6 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 733 | 787 | 4.73E-13 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 732 | 796 | 1.3E-15 | IPR013083 |
| SMART | SM00249 | PHD_3 | 743 | 783 | 1.1E-10 | IPR001965 |
| ProSiteProfiles | PS51186 | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 890 | 1041 | 9.449879 | IPR000182 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 741 | 785 | 9.0984 | IPR019787 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 392 | 414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 434 | 449 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 573 | 597 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 174 | 190 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 392 | 469 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 250 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1410 | 1435 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 174 | 197 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 331 | 353 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 220 | 246 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14920.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein. | 0 |
| RefSeq | XP_039793540.1 | increased DNA methylation 1-like isoform X1 [Panicum virgatum] | 0 |
| F4IXE7 | Increased DNA methylation 1 OS=Arabidopsis thaliana OX=3702 GN=IDM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9W0M9 | PHD-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_15208 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology