Basic Information
Locus ID:
gene-QOZ80_7BG0586280
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7B | 2759816 | 2763219 | - | gene-QOZ80_7BG0586280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 80,966.57 Da | 50.52 | 82.84 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03514 | GRAS domain family | 2 | 281 | 7.0E-54 | IPR005202 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 389 | 688 | 6.4E-38 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 367 | 690 | 3.83E-65 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 347 | 473 | 1.9E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 476 | 694 | 5.0E-46 | - |
| SMART | SM00220 | serkin_6 | 385 | 689 | 1.5E-22 | IPR000719 |
| ProSiteProfiles | PS50985 | GRAS family profile. | 1 | 380 | 29.672573 | IPR005202 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 385 | 703 | 33.488407 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 391 | 413 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 517 | 529 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G37650.1 | GRAS family transcription factor. Involved in radial organization of the root and shoot axial organs. Essential for normal shoot gravitropism. The protein moves in a highly specific manner from the cells of the stele in which it is synthesized outward. Movement requires sequences within the GRAS and VHIID domains. | 0 |
| RefSeq | XP_002465775.1 | rust resistance kinase Lr10 [Sorghum bicolor] | 0 |
| Q8H2X8 | Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3L6RHG0 | G-type lectin S-receptor-like serine/threonine-protein kinase OS=Panicum miliaceum OX=4540 GN=C2845_PM13G07890 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology