Basic Information
Locus ID:
gene-QOZ80_7BG0586050
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7B | 2567325 | 2568644 | - | gene-QOZ80_7BG0586050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.07 | 48,254.23 Da | 44.79 | 87.97 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 48 | 154 | 4.67034E-7 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 222 | 337 | 1.2E-20 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 204 | 339 | 1.57E-26 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 21 | 159 | 9.65E-15 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 16 | 158 | 1.6E-13 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 205 | 337 | 4.1E-31 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 339 | 412 | 1.1E-12 | - |
| SMART | SM00225 | BTB_4 | 229 | 339 | 9.2E-23 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 229 | 301 | 16.69342 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 12 | 154 | 10.290989 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_004958935.1 | BTB/POZ and MATH domain-containing protein 1 [Setaria italica] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9W114 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_14488 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_7AG0554960, gene-QOZ80_7BG0586030 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr24G001820 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-53944 |