Basic Information
Locus ID:
gene-QOZ80_7BG0585910
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7B | 2415041 | 2417041 | + | gene-QOZ80_7BG0585910 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 73,470.96 Da | 37.96 | 91.71 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 359 | 627 | 1.13675E-91 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 23 | 273 | 9.47038E-75 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 354 | 556 | 3.6E-47 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 23 | 282 | 3.9E-63 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 338 | 644 | 2.7E-74 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 23 | 285 | 6.53E-58 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 21 | 272 | 2.5E-58 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 431 | 639 | 8.8E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 324 | 430 | 4.4E-31 | - |
| SMART | SM00220 | serkin_6 | 353 | 625 | 1.0E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 353 | 631 | 37.064308 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 475 | 487 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 359 | 382 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53810.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_039798044.1 | L-type lectin-domain containing receptor kinase SIT2-like [Panicum virgatum] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A835BKG8 | Protein kinase domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_032191 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_7AG0554820, gene-QOZ80_7BG0585910 |