halophFGD

Basic Information

Locus ID: gene-QOZ80_7AG0582730

Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504

Genome Assembly: GCA_032690845.1

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr7A	48369512	48370820	-	gene-QOZ80_7AG0582730

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.95	42,942.53 Da	54.47	74.44	-0.25

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	1	62	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	29	43	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	46	62	-	-

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_039822204.1	uncharacterized protein LOC120684401 [Panicum virgatum]	0
TrEMBL	A0A4V6D366	F-box domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_8G182700v2 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	16	AH04.1756, AH06.1281, BH04.1756, BH04.1847, BH04.1848 ... BH04.1849, BH04.1851, BH04.1852, BH04.1853, BH04.1854, BH04.1855, CH04.2003, CH04.2074, CH04.2076, CH04.2078, CH04.2080
Poaceae	Eleusine coracana subsp. coracana	10	gene-QOZ80_1BG0086560, gene-QOZ80_6AG0515020 ... gene-QOZ80_6BG0466740, gene-QOZ80_7AG0582730, gene-QOZ80_9AG0683380, gene-QOZ80_9AG0683440, gene-QOZ80_9AG0683450, gene-QOZ80_9BG0709140, gene-QOZ80_9BG0709150, gene-QOZ80_9BG0709690
Poaceae	Hordeum vulgare	1	HORVU.MOREX.r3.7HG0654230.1.CDS1
Poaceae	Lolium multiflorum	1	gene-QYE76_066373
Poaceae	Oryza coarctata	3	Oco21G008030, Oco22G008270, Oco22G009240
Poaceae	Oryza sativa	8	LOC_Os04g25140.1, LOC_Os04g26240.1, LOC_Os04g26260.1 ... LOC_Os08g19680.1, LOC_Os11g38190.1, LOC_Os11g38200.1, LOC_Os11g38230.1, LOC_Os11g38250.1
Poaceae	Paspalum vaginatum	7	gene-BS78_04G157700, gene-BS78_05G190500, gene-BS78_K170500 ... gene-BS78_05G190600, gene-BS78_05G191400, gene-BS78_05G191600, gene-BS78_05G191800
Poaceae	Puccinellia tenuiflora	1	Pt_Chr0103201
Poaceae	Sporobolus alterniflorus	6	Chr07G015460, Chr07G015470, Chr16G005180, Chr16G005200 ... Chr31G007380, Chr31G007390
Poaceae	Thinopyrum elongatum	1	Tel7E01G234900
Poaceae	Triticum dicoccoides	2	gene_TRIDC7AG013710, gene_TRIDC7BG002110
Poaceae	Triticum aestivum	3	TraesCS7A02G118000.1.cds1, TraesCS7B02G015000.1.cds1 ... TraesCS7D02G113500.1.cds1
Poaceae	Zea mays	2	Zm00001eb114820_P001, Zm00001eb167580_P001
Poaceae	Zoysia japonica	1	nbis-gene-46147
Poaceae	Zoysia macrostachya	1	Zma_g19026