Basic Information
Locus ID:
gene-QOZ80_7AG0580160
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
RhoGAP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7A | 46402491 | 46409643 | + | gene-QOZ80_7AG0580160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 93,950.12 Da | 49.24 | 82.60 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00821 | PH | 31 | 130 | 1.21374E-11 | - |
| CDD | cd00159 | RhoGAP | 191 | 330 | 1.37846E-34 | - |
| Pfam | PF00620 | RhoGAP domain | 191 | 335 | 2.7E-31 | IPR000198 |
| Pfam | PF00169 | PH domain | 30 | 134 | 7.5E-12 | IPR001849 |
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 608 | 688 | 2.9E-21 | IPR025757 |
| SUPERFAMILY | SSF50729 | PH domain-like | 24 | 143 | 1.73E-17 | - |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 191 | 384 | 5.89E-34 | IPR008936 |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 161 | 384 | 3.5E-42 | IPR008936 |
| Gene3D | G3DSA:2.30.29.30 | - | 18 | 136 | 1.4E-16 | IPR011993 |
| SMART | SM00233 | PH_update | 29 | 137 | 2.9E-15 | IPR001849 |
| SMART | SM00324 | RhoGAP_3 | 188 | 379 | 2.1E-28 | IPR000198 |
| ProSiteProfiles | PS50003 | PH domain profile. | 28 | 135 | 15.2991 | IPR001849 |
| ProSiteProfiles | PS50238 | Rho GTPase-activating proteins domain profile. | 182 | 382 | 30.863449 | IPR000198 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 393 | 424 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 532 | 565 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 531 | 568 | - | - |
| Coils | Coil | Coil | 598 | 632 | - | - |
| Coils | Coil | Coil | 811 | 831 | - | - |
| Coils | Coil | Coil | 671 | 691 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19390.1 | Rho GTPase activation protein (RhoGAP) with PH domain. Encodes a protein with similarity to REN1, a Rho GTPase activating protein. | 0 |
| RefSeq | XP_004958566.1 | rho GTPase-activating protein 7 isoform X4 [Setaria italica] | 0 |
| Q8RWQ4 | Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1 | 0 | |
| TrEMBL | K3ZQL8 | Rho GTPase-activating protein 7-like OS=Setaria italica OX=4555 GN=101765349 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology